A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6702237



Internal ID9767216
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:1080972..1081643hg38UCSC Ensembl
Outerchr11:1079383..1079639hg19UCSC Ensembl
Cytoband11p15.5
Allele length
AssemblyAllele length
hg38672
hg19257
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2743878, esv2743893
Supporting Variants
SamplesSSM039
Known GenesMUC2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6702237
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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