A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6700144



Internal ID9769601
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:237544568..237545257hg38UCSC Ensembl
Outerchr2:238453211..238453900hg19UCSC Ensembl
Cytoband2q37.3
Allele length
AssemblyAllele length
hg38690
hg19690
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2721727
Supporting Variants
SamplesSSM039
Known GenesMLPH
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6700144
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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