A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6699726



Internal ID9769207
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:161549726..161631168hg38UCSC Ensembl
Outerchr1:161519516..161600958hg19UCSC Ensembl
Cytoband1q23.3
Allele length
AssemblyAllele length
hg3881443
hg1981443
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718873
Supporting Variants
SamplesSSM039
Known GenesFCGR2C, FCGR3A, FCGR3B, HSPA7
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6699726
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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