A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6699299



Internal ID9996542
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:98149899..98208135hg38UCSC Ensembl
Outerchr3:97868743..97926979hg19UCSC Ensembl
Cytoband3q11.2
Allele length
AssemblyAllele length
hg3858237
hg1958237
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2725670, esv2725672
Supporting Variants
SamplesSSM006
Known GenesOR5H14, OR5H15
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6699299
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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