A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6699093



Internal ID10111207
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:32085389..33028748hg38UCSC Ensembl
Outerchr16:32096710..33040069hg19UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg38943360
hg19943360
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2714201
Supporting Variants
SamplesSSM038
Known GenesHERC2P4, LOC390705, SLC6A10P, TP53TG3, TP53TG3B, TP53TG3C, TP53TG3D
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6699093
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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