A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6697639



Internal ID9765418
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:143745932..144154188hg38UCSC Ensembl
Outerchr4:144667085..145075341hg19UCSC Ensembl
Cytoband4q31.21
Allele length
AssemblyAllele length
hg38408257
hg19408257
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2728476
Supporting Variants
SamplesSSM038
Known GenesGYPA, GYPB, GYPE
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6697639
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer