A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6692582



Internal ID10105912
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr22:43280851..43281380hg38UCSC Ensembl
Outerchr22:43676857..43677386hg19UCSC Ensembl
Cytoband22q13.2
Allele length
AssemblyAllele length
hg38530
hg19530
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2724304, esv2724307, esv2724305
Supporting Variants
SamplesSSM036
Known GenesSCUBE1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6692582
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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