A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6691812



Internal ID9758332
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr13:113831894..113832140hg38UCSC Ensembl
Outerchr13:114534867..114535113hg19UCSC Ensembl
Cytoband13q34
Allele length
AssemblyAllele length
hg38247
hg19247
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2748407, esv2748403, esv2748405
Supporting Variants
SamplesSSM036
Known GenesGAS6, GAS6-AS1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6691812
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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