A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6689360



Internal ID9758694
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:159042642..159046898hg38UCSC Ensembl
Outerchr1:159012432..159016688hg19UCSC Ensembl
Cytoband1q23.1
Allele length
AssemblyAllele length
hg384257
hg194257
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718684
Supporting Variants
SamplesSSM036
Known GenesIFI16
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6689360
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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