A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6688703



Internal ID10102828
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:46383469..46392927hg38UCSC Ensembl
Outerchr16:46417381..46426839hg19UCSC Ensembl
Cytoband16q11.2
Allele length
AssemblyAllele length
hg389459
hg199459
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2714390, esv2714387, esv2714384, esv2714389, esv2714381, esv2714382
Supporting Variants
SamplesSSM035
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6688703
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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