A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6684903



Internal ID9752775
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:1080896..1081543hg38UCSC Ensembl
Outerchr11:1079310..1079539hg19UCSC Ensembl
Cytoband11p15.5
Allele length
AssemblyAllele length
hg38648
hg19230
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2743878
Supporting Variants
SamplesSSM034
Known GenesMUC2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6684903
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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