A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6683290



Internal ID10098012
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:38877099..38877298hg38UCSC Ensembl
Outerchr3:38918590..38918789hg19UCSC Ensembl
Cytoband3p22.2
Allele length
AssemblyAllele length
hg38200
hg19200
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2725165, esv2725167, esv2725168
Supporting Variants
SamplesSSM034
Known GenesSCN11A
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6683290
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer