A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6683071



Internal ID9753553
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:32999399..33002197hg38UCSC Ensembl
Outerchr2:33224466..33227264hg19UCSC Ensembl
Cytoband2p22.3
Allele length
AssemblyAllele length
hg382799
hg192799
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2719883
Supporting Variants
SamplesSSM034
Known GenesLTBP1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6683071
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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