A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6679392



Internal ID9749064
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:247870777..247871067hg38UCSC Ensembl
Outerchr1:248034079..248034369hg19UCSC Ensembl
Cytoband1q44
Allele length
AssemblyAllele length
hg38291
hg19291
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2727906
Supporting Variants
SamplesSSM033
Known GenesTRIM58
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6679392
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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