A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6679287



Internal ID9748970
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:159044097..159048408hg38UCSC Ensembl
Outerchr1:159013887..159018198hg19UCSC Ensembl
Cytoband1q23.1
Allele length
AssemblyAllele length
hg384312
hg194312
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718684
Supporting Variants
SamplesSSM033
Known GenesIFI16
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6679287
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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