A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6672841



Internal ID9743916
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:1076425..1076569hg19UCSC Ensembl
Cytoband11p15.5
Allele length
AssemblyAllele length
hg19145
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2743889, esv2743878, esv2743888
Supporting Variants
SamplesSSM031
Known GenesMUC2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6672841
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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