A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6672832



Internal ID9994128
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:241566702..241567874hg38UCSC Ensembl
Outerchr2:242506117..242507289hg19UCSC Ensembl
Cytoband2q37.3
Allele length
AssemblyAllele length
hg381173
hg191173
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2722009
Supporting Variants
SamplesSSM005
Known GenesBOK
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6672832
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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