A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6672228



Internal ID9738806
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr8:139677868..139677922hg38UCSC Ensembl
Outerchr8:140690111..140690165hg19UCSC Ensembl
Cytoband8q24.3
Allele length
AssemblyAllele length
hg3855
hg1955
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2737715, esv2737717, esv2737716
Supporting Variants
SamplesSSM031
Known GenesKCNK9
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6672228
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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