A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6672099



Internal ID9648240
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:131086728..131087083hg38UCSC Ensembl
Outerchr2:131844301..131844656hg19UCSC Ensembl
Cytoband2q21.1
Allele length
AssemblyAllele length
hg38356
hg19356
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2720771, esv2720778, esv2720774
Supporting Variants
SamplesSSM005
Known GenesFAM168B
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6672099
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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