A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6670752



Internal ID9740134
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr5:36286927..36287001hg38UCSC Ensembl
Outerchr5:36287029..36287103hg19UCSC Ensembl
Cytoband5p13.2
Allele length
AssemblyAllele length
hg3875
hg1975
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2730077
Supporting Variants
SamplesSSM031
Known GenesRANBP3L
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6670752
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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