A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6669037



Internal ID10088364
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:74289493..74289590hg38UCSC Ensembl
Outerchr1:74755177..74755274hg19UCSC Ensembl
Cytoband1p31.1
Allele length
AssemblyAllele length
hg3898
hg1998
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2749952, esv2749941
Supporting Variants
SamplesSSM031
Known GenesFPGT-TNNI3K, TNNI3K
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6669037
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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