A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6667454



Internal ID9645016
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:56198329..56228824hg38UCSC Ensembl
Outerchr19:56709698..56740193hg19UCSC Ensembl
Cytoband19q13.43
Allele length
AssemblyAllele length
hg3830496
hg1930496
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2719027
Supporting Variants
SamplesSSM004
Known GenesZSCAN5A
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6667454
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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