A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6666527



Internal ID9733337
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:52973948..52974647hg38UCSC Ensembl
Outerchr19:53477201..53477900hg19UCSC Ensembl
Cytoband19q13.41
Allele length
AssemblyAllele length
hg38700
hg19700
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718808, esv2718787, esv2718796
Supporting Variants
SamplesSSM029
Known GenesZNF702P
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6666527
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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