Variant Details

Variant: essv5363903

Internal ID

8108952

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr10:46265955..46309183	hg38	UCSC Ensembl
Outer	chr10:46265494..46309470	hg38	UCSC Ensembl
Inner	chr10:47637191..47680419	hg19	UCSC Ensembl
Outer	chr10:47636730..47680706	hg19	UCSC Ensembl
Inner	chr10:47107197..47150425	hg18	UCSC Ensembl
Outer	chr10:47106736..47150712	hg18	UCSC Ensembl

Cytoband

10q11.22

Allele length

Assembly	Allele length
hg38	43977
hg19	43977
hg18	43977

Variant Type

OTHER inversion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

esv2475335

Supporting Variants

Samples

NA18507

Known Genes

ANTXRL, ANTXRLP1

Method

Sequencing

Analysis

Inversions are detected using the AB Inversion Tool. When one end of a mate pair maps to the opposite strand of the other, the pair provides evidence of an inversion. Multiple instances in the same area will be a positive call.

Platform

Not specified

Comments

originalFile=Yoruban_inv.gff

Reference

McKernan_et_al_2009

Pubmed ID

19546169

Accession Number(s)

essv5363903

Frequency

Sample Size	1
Observed Gain	0
Observed Loss	0
Observed Complex	0
Frequency	n/a