A curated catalogue of human genomic structural variation




Variant Details

Variant: essv5362589



Internal ID8454324
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:10263977..10266288hg38UCSC Ensembl
Outerchr6:10264210..10266521hg19UCSC Ensembl
Outerchr6:10372196..10374507hg18UCSC Ensembl
Cytoband6p24.3
Allele length
AssemblyAllele length
hg382312
hg192312
hg182312
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2544903
Supporting Variants
SamplesNA18507
Known Genes
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)essv5362589
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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