A curated catalogue of human genomic structural variation




Variant Details

Variant: essv5326227



Internal ID8071276
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:1009527..1010525hg38UCSC Ensembl
Outerchr10:1055467..1056465hg19UCSC Ensembl
Outerchr10:1045467..1046465hg18UCSC Ensembl
Cytoband10p15.3
Allele length
AssemblyAllele length
hg38250
hg19250
hg18250
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2551854
Supporting Variants
SamplesNA18507
Known GenesGTPBP4
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)essv5326227
Frequency
Sample Size1
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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