A curated catalogue of human genomic structural variation




Variant Details

Variant: essv5320738



Internal ID8412473
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:19116247..19116793hg38UCSC Ensembl
Outerchr19:19227056..19227602hg19UCSC Ensembl
Outerchr19:19088056..19088602hg18UCSC Ensembl
Cytoband19p13.11
Allele length
AssemblyAllele length
hg38634
hg19634
hg18634
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2531796
Supporting Variants
SamplesNA18507
Known Genes
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)essv5320738
Frequency
Sample Size1
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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