A curated catalogue of human genomic structural variation




Variant Details

Variant: essv5287176



Internal ID8032225
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:91796558..91798946hg38UCSC Ensembl
Outerchr9:94558840..94561228hg19UCSC Ensembl
Outerchr9:93598661..93601049hg18UCSC Ensembl
Cytoband9q22.31
Allele length
AssemblyAllele length
hg382389
hg192389
hg182389
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2433329
Supporting Variants
SamplesNA18507
Known GenesROR2
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)essv5287176
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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