A curated catalogue of human genomic structural variation




Variant Details

Variant: essv5252546



Internal ID8344281
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:28184503..28185444hg38UCSC Ensembl
Outerchr15:28429649..28430590hg19UCSC Ensembl
Outerchr15:26103244..26104185hg18UCSC Ensembl
Cytoband15q13.1
Allele length
AssemblyAllele length
hg38268
hg19268
hg18268
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2475219
Supporting Variants
SamplesNA18507
Known GenesHERC2
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)essv5252546
Frequency
Sample Size1
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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