A curated catalogue of human genomic structural variation




Variant Details

Variant: essv5240161



Internal ID8331896
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr8:107367943..107369559hg38UCSC Ensembl
Outerchr8:108380171..108381787hg19UCSC Ensembl
Outerchr8:108449347..108450963hg18UCSC Ensembl
Cytoband8q23.1
Allele length
AssemblyAllele length
hg381617
hg191617
hg181617
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2508144
Supporting Variants
SamplesNA18507
Known GenesANGPT1
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)essv5240161
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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