A curated catalogue of human genomic structural variation




Variant Details

Variant: essv5202238



Internal ID8293973
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:67665735..67667363hg38UCSC Ensembl
Outerchr7:67130722..67132350hg19UCSC Ensembl
Outerchr7:66768157..66769785hg18UCSC Ensembl
Cytoband7q11.22
Allele length
AssemblyAllele length
hg381629
hg191629
hg181629
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2654031
Supporting Variants
SamplesNA18507
Known Genes
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)essv5202238
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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