A curated catalogue of human genomic structural variation




Variant Details

Variant: essv5164520



Internal ID8256255
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr13:74526488..74527946hg38UCSC Ensembl
Outerchr13:75100625..75102083hg19UCSC Ensembl
Outerchr13:73998626..74000084hg18UCSC Ensembl
Cytoband13q22.1
Allele length
AssemblyAllele length
hg381459
hg191459
hg181459
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2612004
Supporting Variants
SamplesNA18507
Known Genes
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)essv5164520
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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