A curated catalogue of human genomic structural variation




Variant Details

Variant: essv5162591



Internal ID8254326
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:31277064..31278583hg38UCSC Ensembl
Outerchr15:31569267..31570786hg19UCSC Ensembl
Outerchr15:29356559..29358078hg18UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg381520
hg191520
hg181520
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2602863
Supporting Variants
SamplesNA18507
Known Genes
MethodSequencing
AnalysisLarger insertions and deletions are found by looking at variation in mate pair distances in the 2x50 mate pair libraries. These data are included in separate files for each of three coverage values: 2.2x, 4.0x, 5.6x, and 8.4x
PlatformNot specified
CommentsoriginalFile=Yoruban_large_indels_8.4x.gff
ReferenceMcKernan_et_al_2009
Pubmed ID19546169
Accession Number(s)essv5162591
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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