A curated catalogue of human genomic structural variation




Variant Details

Variant: essv5010421



Internal ID7754279
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:29883666..29931370hg38UCSC Ensembl
Innerchr6:29851443..29899147hg19UCSC Ensembl
Innerchr6:29959422..30007126hg18UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg3847705
hg1947705
hg1847705
Variant TypeCNV deletion
Copy Number1
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2421903
Supporting Variants
SamplesNA20528
Known GenesHCG4B, HLA-H
MethodSNP array
AnalysisTo assess copy number variation we merged and analysed the probe level intensity data from both the Affymetrix and Illumina arrays.
PlatformNot specified
Comments
ReferenceAltshuler_et_al_2010
Pubmed ID20811451
Accession Number(s)essv5010421
Frequency
Sample Size1184
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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