Variant Details

Variant: essv4820323

Internal ID

7059269

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr12:101920300..101920381	hg38	UCSC Ensembl
Outer	chr12:101920087..101920592	hg38	UCSC Ensembl
Inner	chr12:102314078..102314159	hg19	UCSC Ensembl
Outer	chr12:102313865..102314370	hg19	UCSC Ensembl
Inner	chr12:100838209..100838290	hg18	UCSC Ensembl
Outer	chr12:100837996..100838501	hg18	UCSC Ensembl

Cytoband

12q23.2

Allele length

Assembly	Allele length
hg38	506
hg19	506
hg18	506

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

esv2318192

Supporting Variants

Samples

NA18507

Known Genes

DRAM1

Method

Sequencing

Analysis

Hierarchical clustering of anomalous readpairs was used to identify groupings of five or more readpairs that had a similar size and position. Read pairs were defined as anomalous if they had high-confidence alignments of each individual read that nevertheless were either incorrectly oriented or implied an insert size of at least 3 standard deviations outside the sample median.

Platform

Not specified

Comments

Reference

Bentley_et_al_2008

Pubmed ID

18987734

Accession Number(s)

essv4820323

Frequency

Sample Size	1
Observed Gain	0
Observed Loss	1
Observed Complex	0
Frequency	n/a