Variant Details

Variant: essv4513034

Internal ID

7098666

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr8:142483322..142483507	hg38	UCSC Ensembl
Outer	chr8:142483244..142483597	hg38	UCSC Ensembl
Inner	chr8:143564683..143564868	hg19	UCSC Ensembl
Outer	chr8:143564605..143564958	hg19	UCSC Ensembl
Inner	chr8:143561685..143561870	hg18	UCSC Ensembl
Outer	chr8:143561607..143561960	hg18	UCSC Ensembl

Cytoband

8q24.3

Allele length

Assembly	Allele length
hg38	354
hg19	354
hg18	354

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

esv1969642

Supporting Variants

Samples

NA18507

Known Genes

BAI1

Method

Sequencing

Analysis

Hierarchical clustering of anomalous readpairs was used to identify groupings of five or more readpairs that had a similar size and position. Read pairs were defined as anomalous if they had high-confidence alignments of each individual read that nevertheless were either incorrectly oriented or implied an insert size of at least 3 standard deviations outside the sample median.

Platform

Not specified

Comments

Reference

Bentley_et_al_2008

Pubmed ID

18987734

Accession Number(s)

essv4513034

Frequency

Sample Size	1
Observed Gain	0
Observed Loss	1
Observed Complex	0
Frequency	n/a