A curated catalogue of human genomic structural variation




Variant Details

Variant: essv25780546



Internal ID18827135
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:71009726..71080664hg38UCSC Ensembl
Innerchr5:70305553..70376491hg19UCSC Ensembl
Innerchr5:70341309..70412247hg18UCSC Ensembl
Cytoband5q13.2
Allele length
AssemblyAllele length
hg3870939
hg1970939
hg1870939
Variant TypeCNV loss
Copy Number1
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3890644
Supporting Variants
Samples
Known GenesGTF2H2, GTF2H2B, GTF2H2C, GTF2H2D, LOC647859, NAIP
MethodSNP array
Analysis
PlatformIllumina HumanHap 610
CommentsNumber of probes=12
ReferenceSuktitipat_et_al_2014
Pubmed ID25118596
Accession Number(s)essv25780546
Frequency
Sample Size3017
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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