A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16501685



Internal ID19365245
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:112849148..112849237hg38UCSC Ensembl
chr11:112719871..112719960hg19UCSC Ensembl
Cytoband11q23.2
Allele length
AssemblyAllele length
hg3890
hg1990
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3680534
Supporting Variants
Samples
Known Genes
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16501685
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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