A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16500863



Internal ID19017737
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:93779445..93779558hg38UCSC Ensembl
chr10:95539202..95539315hg19UCSC Ensembl
Cytoband10q23.33
Allele length
AssemblyAllele length
hg38114
hg19114
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3679621
Supporting Variants
Samples
Known GenesLGI1
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16500863
Frequency
Sample Size20
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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