A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16496527



Internal ID19013401
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:119535983..119536044hg38UCSC Ensembl
chr3:119254830..119254891hg19UCSC Ensembl
Cytoband3q13.33
Allele length
AssemblyAllele length
hg3862
hg1962
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3674804
Supporting Variants
Samples
Known GenesCD80
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16496527
Frequency
Sample Size20
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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