A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16495309



Internal ID19012183
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr16:14439392..14439482hg38UCSC Ensembl
chr16:14533249..14533339hg19UCSC Ensembl
Cytoband16p13.12
Allele length
AssemblyAllele length
hg3891
hg1991
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3673451
Supporting Variants
Samples
Known GenesPARN
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16495309
Frequency
Sample Size20
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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