A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16495208



Internal ID19012082
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:40333566..40333573hg38UCSC Ensembl
chr15:40625767..40625774hg19UCSC Ensembl
Cytoband15q15.1
Allele length
AssemblyAllele length
hg388
hg198
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3673338
Supporting Variants
Samples
Known GenesC15orf52
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16495208
Frequency
Sample Size20
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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