A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16495207



Internal ID19358767
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr15:39747082..39747135hg38UCSC Ensembl
chr15:40039283..40039336hg19UCSC Ensembl
Cytoband15q14
Allele length
AssemblyAllele length
hg3854
hg1954
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3673337
Supporting Variants
Samples
Known GenesFSIP1
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16495207
Frequency
Sample Size20
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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