A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16492238



Internal ID19009112
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:37879028..37879224hg38UCSC Ensembl
chr1:38344700..38344896hg19UCSC Ensembl
Cytoband1p34.3
Allele length
AssemblyAllele length
hg38197
hg19197
Variant TypeOTHER complex substitution
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3670037
Supporting Variants
Samples
Known GenesINPP5B
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16492238
Frequency
Sample Size20
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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