A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16491235



Internal ID19354795
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr11:126653327..126653327hg38UCSC Ensembl
chr11:126523222..126523222hg19UCSC Ensembl
Cytoband11q24.2
Allele length
AssemblyAllele length
hg3877
hg1977
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3668923
Supporting Variants
Samples
Known GenesKIRREL3
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16491235
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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