A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16486490



Internal ID19350050
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:179147368..179147368hg38UCSC Ensembl
chr2:180012095..180012095hg19UCSC Ensembl
Cytoband2q31.2
Allele length
AssemblyAllele length
hg38177
hg19177
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3663651
Supporting Variants
Samples
Known GenesSESTD1
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16486490
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer