A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16486004



Internal ID19002878
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr2:99581853..99581853hg38UCSC Ensembl
chr2:100198315..100198315hg19UCSC Ensembl
Cytoband2q11.2
Allele length
AssemblyAllele length
hg38264
hg19264
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3663112
Supporting Variants
Samples
Known GenesAFF3
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16486004
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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