A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16484455



Internal ID19348015
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr22:17998159..17998159hg38UCSC Ensembl
chr22:18480925..18480925hg19UCSC Ensembl
Cytoband22q11.21
Allele length
AssemblyAllele length
hg3877
hg1977
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3661391
Supporting Variants
Samples
Known GenesMICAL3
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16484455
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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