A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16482389



Internal ID19345949
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr18:59004006..59004006hg38UCSC Ensembl
chr18:56671238..56671238hg19UCSC Ensembl
Cytoband18q21.32
Allele length
AssemblyAllele length
hg3860
hg1960
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3659094
Supporting Variants
Samples
Known Genes
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16482389
Frequency
Sample Size20
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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