A curated catalogue of human genomic structural variation




Variant Details

Variant: essv16482304



Internal ID18999178
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:10895695..10895765hg38UCSC Ensembl
chr6:10895928..10895998hg19UCSC Ensembl
Cytoband6p24.2
Allele length
AssemblyAllele length
hg3871
hg1971
Variant TypeOTHER complex substitution
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv3659001
Supporting Variants
Samples
Known GenesSYCP2L
MethodSequencing
Analysisde novo assemblies produced from SoapDenovo2 were aligned to GRC37 using LAST and input into SoapAsmVar for population-wide structural variation detection. The method is described in the publication
PlatformIllumina HiSeq 2000
Comments
ReferenceBesenbacher_et_al_2015
Pubmed ID25597990
Accession Number(s)essv16482304
Frequency
Sample Size20
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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